Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf1Q07802 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf1Q07802 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ebf1Q07802 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ebf1Q07802 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ebf1Q07802 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm2272-201ENSMUST00000194903 582 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.26■□□□□ 0.03
Ebf1Q07802 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.26■□□□□ 0.03
Ebf1Q07802 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ebf1Q07802 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Gm22175-201ENSMUST00000175007 78 ntBASIC15.25■□□□□ 0.03
Ebf1Q07802 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.25■□□□□ 0.03
Ebf1Q07802 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ebf1Q07802 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Ebf1Q07802 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22065-201ENSMUST00000103753 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22066-201ENSMUST00000103761 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24932-201ENSMUST00000103763 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24115-201ENSMUST00000103799 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22190-201ENSMUST00000103827 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22191-201ENSMUST00000103831 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24721-201ENSMUST00000103849 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm28018-201ENSMUST00000103869 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm26399-201ENSMUST00000103937 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms