Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Gm22334-201ENSMUST00000158070 133 ntBASIC14.73□□□□□ -0.05
Col9a1Q05722 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Gm44364-201ENSMUST00000198368 141 ntBASIC14.73□□□□□ -0.05
Col9a1Q05722 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col9a1Q05722 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a1Q05722 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC14.72□□□□□ -0.05
Col9a1Q05722 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Rps4l-202ENSMUST00000204242 789 ntBASIC14.72□□□□□ -0.05
Col9a1Q05722 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.72□□□□□ -0.05
Col9a1Q05722 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.72□□□□□ -0.05
Col9a1Q05722 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col9a1Q05722 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a1Q05722 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm18595-201ENSMUST00000175736 1068 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm45071-201ENSMUST00000205353 571 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm45166-201ENSMUST00000209073 683 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm45880-201ENSMUST00000213041 853 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.71□□□□□ -0.05
Col9a1Q05722 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col9a1Q05722 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a1Q05722 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.71□□□□□ -0.06
Col9a1Q05722 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Col9a1Q05722 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Col9a1Q05722 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col9a1Q05722 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col9a1Q05722 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.7□□□□□ -0.06
Col9a1Q05722 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.7□□□□□ -0.06
Col9a1Q05722 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.7□□□□□ -0.06
Col9a1Q05722 Gm14776-201ENSMUST00000121029 887 ntBASIC14.7□□□□□ -0.06
Col9a1Q05722 Gm25318-201ENSMUST00000122554 314 ntBASIC14.7□□□□□ -0.06
Col9a1Q05722 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Gm27516-201ENSMUST00000184237 98 ntBASIC14.7□□□□□ -0.06
Col9a1Q05722 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col9a1Q05722 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col9a1Q05722 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms