Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.77■□□□□ 0.6
Col1a2Q01149 Gm8749-201ENSMUST00000117737 331 ntBASIC18.77■□□□□ 0.6
Col1a2Q01149 Gm27306-201ENSMUST00000183970 107 ntBASIC18.77■□□□□ 0.6
Col1a2Q01149 Gm27321-201ENSMUST00000185021 205 ntBASIC18.77■□□□□ 0.6
Col1a2Q01149 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.77■□□□□ 0.59
Col1a2Q01149 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.76■□□□□ 0.59
Col1a2Q01149 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.76■□□□□ 0.59
Col1a2Q01149 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col1a2Q01149 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.75■□□□□ 0.59
Col1a2Q01149 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Gm8410-201ENSMUST00000117225 605 ntBASIC18.75■□□□□ 0.59
Col1a2Q01149 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Gm45098-201ENSMUST00000207179 657 ntBASIC18.75■□□□□ 0.59
Col1a2Q01149 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col1a2Q01149 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col1a2Q01149 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
Col1a2Q01149 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Gm13453-201ENSMUST00000118708 357 ntBASIC18.74■□□□□ 0.59
Col1a2Q01149 Gm12151-201ENSMUST00000121374 290 ntBASIC18.74■□□□□ 0.59
Col1a2Q01149 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.74■□□□□ 0.59
Col1a2Q01149 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.74■□□□□ 0.59
Col1a2Q01149 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.74■□□□□ 0.59
Col1a2Q01149 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.74■□□□□ 0.59
Col1a2Q01149 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Gm6888-201ENSMUST00000221983 706 ntBASIC18.74■□□□□ 0.59
Col1a2Q01149 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.74■□□□□ 0.59
Col1a2Q01149 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col1a2Q01149 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col1a2Q01149 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col1a2Q01149 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col1a2Q01149 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms