Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.67□□□□□ -0.38
Npas1P97459 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.67□□□□□ -0.38
Npas1P97459 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Gm7889-201ENSMUST00000185591 958 ntBASIC12.67□□□□□ -0.38
Npas1P97459 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.67□□□□□ -0.38
Npas1P97459 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.67□□□□□ -0.38
Npas1P97459 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Npas1P97459 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Npas1P97459 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npas1P97459 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Npas1P97459 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npas1P97459 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.66□□□□□ -0.38
Npas1P97459 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.66□□□□□ -0.38
Npas1P97459 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.66□□□□□ -0.38
Npas1P97459 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.66□□□□□ -0.38
Npas1P97459 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.66□□□□□ -0.38
Npas1P97459 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Npas1P97459 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npas1P97459 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.65□□□□□ -0.38
Npas1P97459 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Npas1P97459 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.65□□□□□ -0.38
Npas1P97459 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.65□□□□□ -0.38
Npas1P97459 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.65□□□□□ -0.38
Npas1P97459 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.65□□□□□ -0.38
Npas1P97459 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Npas1P97459 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms