Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-3P97334 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.85■□□□□ 0.61
Nkx2-3P97334 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Gm7488-201ENSMUST00000117148 684 ntBASIC18.85■□□□□ 0.61
Nkx2-3P97334 Mir1897-201ENSMUST00000122581 272 ntBASIC18.85■□□□□ 0.61
Nkx2-3P97334 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.85■□□□□ 0.61
Nkx2-3P97334 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-3P97334 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.84■□□□□ 0.61
Nkx2-3P97334 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.84■□□□□ 0.61
Nkx2-3P97334 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nkx2-3P97334 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.84■□□□□ 0.61
Nkx2-3P97334 Syt7-205ENSMUST00000224135 1557 ntBASIC18.84■□□□□ 0.61
Nkx2-3P97334 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-3P97334 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.83■□□□□ 0.61
Nkx2-3P97334 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.83■□□□□ 0.61
Nkx2-3P97334 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-3P97334 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nkx2-3P97334 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.83■□□□□ 0.6
Nkx2-3P97334 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Nkx2-3P97334 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-3P97334 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Gm6218-201ENSMUST00000219812 628 ntBASIC18.82■□□□□ 0.6
Nkx2-3P97334 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-3P97334 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms