Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SgcbP82349 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.44□□□□□ -0.26
SgcbP82349 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.44□□□□□ -0.26
SgcbP82349 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.44□□□□□ -0.26
SgcbP82349 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SgcbP82349 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Gm17271-201ENSMUST00000165535 355 ntBASIC13.44□□□□□ -0.26
SgcbP82349 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Mir8117-201ENSMUST00000184773 107 ntBASIC13.44□□□□□ -0.26
SgcbP82349 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.44□□□□□ -0.26
SgcbP82349 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SgcbP82349 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SgcbP82349 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.44□□□□□ -0.26
SgcbP82349 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SgcbP82349 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
SgcbP82349 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SgcbP82349 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SgcbP82349 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SgcbP82349 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Gm14494-201ENSMUST00000118786 435 ntBASIC13.43□□□□□ -0.26
SgcbP82349 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.43□□□□□ -0.26
SgcbP82349 Gm11594-201ENSMUST00000122313 162 ntBASIC13.43□□□□□ -0.26
SgcbP82349 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.43□□□□□ -0.26
SgcbP82349 Mir3113-201ENSMUST00000175478 76 ntBASIC13.43□□□□□ -0.26
SgcbP82349 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SgcbP82349 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
SgcbP82349 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SgcbP82349 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SgcbP82349 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.43□□□□□ -0.26
SgcbP82349 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcbP82349 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SgcbP82349 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SgcbP82349 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.42□□□□□ -0.26
SgcbP82349 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.42□□□□□ -0.26
SgcbP82349 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.42□□□□□ -0.26
SgcbP82349 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.42□□□□□ -0.26
SgcbP82349 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.42□□□□□ -0.26
SgcbP82349 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcbP82349 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SgcbP82349 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SgcbP82349 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms