Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdlim4P70271 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Gm13036-201ENSMUST00000117799 748 ntBASIC12.56□□□□□ -0.4
Pdlim4P70271 Gm12350-201ENSMUST00000121208 462 ntBASIC12.56□□□□□ -0.4
Pdlim4P70271 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.56□□□□□ -0.4
Pdlim4P70271 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdlim4P70271 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdlim4P70271 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.56□□□□□ -0.4
Pdlim4P70271 Gm44771-201ENSMUST00000206975 626 ntBASIC12.56□□□□□ -0.4
Pdlim4P70271 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.56□□□□□ -0.4
Pdlim4P70271 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pdlim4P70271 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pdlim4P70271 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim4P70271 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.55□□□□□ -0.4
Pdlim4P70271 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.55□□□□□ -0.4
Pdlim4P70271 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gm9682-201ENSMUST00000197505 556 ntBASIC12.55□□□□□ -0.4
Pdlim4P70271 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.55□□□□□ -0.4
Pdlim4P70271 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim4P70271 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim4P70271 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.54□□□□□ -0.4
Pdlim4P70271 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm8318-201ENSMUST00000182954 872 ntBASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms