Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pfn1P62962 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.73□□□□□ -0.53
Pfn1P62962 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfn1P62962 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.73□□□□□ -0.53
Pfn1P62962 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfn1P62962 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfn1P62962 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pfn1P62962 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfn1P62962 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.71□□□□□ -0.53
Pfn1P62962 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfn1P62962 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.71□□□□□ -0.53
Pfn1P62962 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfn1P62962 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.71□□□□□ -0.53
Pfn1P62962 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfn1P62962 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.71□□□□□ -0.53
Pfn1P62962 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.71□□□□□ -0.53
Pfn1P62962 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfn1P62962 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Pfn1P62962 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.71□□□□□ -0.54
Pfn1P62962 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfn1P62962 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfn1P62962 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfn1P62962 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Pfn1P62962 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfn1P62962 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms