Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox3P53784 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.44□□□□□ -0.1
Sox3P53784 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sox3P53784 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox3P53784 Gm44335-201ENSMUST00000196879 141 ntBASIC14.44□□□□□ -0.1
Sox3P53784 Gm44297-201ENSMUST00000198304 141 ntBASIC14.44□□□□□ -0.1
Sox3P53784 Gm44346-201ENSMUST00000198851 141 ntBASIC14.44□□□□□ -0.1
Sox3P53784 Gm45167-201ENSMUST00000208007 322 ntBASIC14.44□□□□□ -0.1
Sox3P53784 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.44□□□□□ -0.1
Sox3P53784 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.44□□□□□ -0.1
Sox3P53784 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.44□□□□□ -0.1
Sox3P53784 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sox3P53784 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sox3P53784 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Sox3P53784 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sox3P53784 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox3P53784 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox3P53784 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox3P53784 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox3P53784 Gm4899-201ENSMUST00000178708 719 ntBASIC14.43□□□□□ -0.1
Sox3P53784 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox3P53784 Gm45612-201ENSMUST00000211320 160 ntBASIC14.43□□□□□ -0.1
Sox3P53784 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.43□□□□□ -0.1
Sox3P53784 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox3P53784 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Sox3P53784 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.43□□□□□ -0.1
Sox3P53784 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox3P53784 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox3P53784 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.42□□□□□ -0.1
Sox3P53784 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox3P53784 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Sox3P53784 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Gm13365-201ENSMUST00000121188 973 ntBASIC14.42□□□□□ -0.1
Sox3P53784 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.42□□□□□ -0.1
Sox3P53784 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox3P53784 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox3P53784 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox3P53784 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox3P53784 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms