Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Shmt1P50431 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.92■□□□□ 0.14
Shmt1P50431 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.92■□□□□ 0.14
Shmt1P50431 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.92■□□□□ 0.14
Shmt1P50431 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.92■□□□□ 0.14
Shmt1P50431 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.92■□□□□ 0.14
Shmt1P50431 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.92■□□□□ 0.14
Shmt1P50431 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Shmt1P50431 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Shmt1P50431 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.92■□□□□ 0.14
Shmt1P50431 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Shmt1P50431 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shmt1P50431 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Shmt1P50431 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Shmt1P50431 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Shmt1P50431 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Shmt1P50431 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Shmt1P50431 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Shmt1P50431 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shmt1P50431 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Shmt1P50431 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm43767-201ENSMUST00000198933 381 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Chchd1-203ENSMUST00000224633 557 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.9■□□□□ 0.14
Shmt1P50431 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Shmt1P50431 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shmt1P50431 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Shmt1P50431 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Shmt1P50431 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.89■□□□□ 0.13
Shmt1P50431 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shmt1P50431 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.89■□□□□ 0.13
Shmt1P50431 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shmt1P50431 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.89■□□□□ 0.13
Shmt1P50431 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms