Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rfx3P48381 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rfx3P48381 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rfx3P48381 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.64□□□□□ -0.23
Rfx3P48381 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.64□□□□□ -0.23
Rfx3P48381 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.64□□□□□ -0.23
Rfx3P48381 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rfx3P48381 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rfx3P48381 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.64□□□□□ -0.23
Rfx3P48381 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfx3P48381 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rfx3P48381 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Gm14722-201ENSMUST00000118943 689 ntBASIC13.63□□□□□ -0.23
Rfx3P48381 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.63□□□□□ -0.23
Rfx3P48381 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rfx3P48381 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Rfx3P48381 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Rfx3P48381 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.63□□□□□ -0.23
Rfx3P48381 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.63□□□□□ -0.23
Rfx3P48381 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfx3P48381 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfx3P48381 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rfx3P48381 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Rfx3P48381 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rfx3P48381 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx3P48381 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfx3P48381 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfx3P48381 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rfx3P48381 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfx3P48381 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx3P48381 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfx3P48381 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms