Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vps4bP46467 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Vps4bP46467 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps4bP46467 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Gm6296-201ENSMUST00000222599 943 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Celf4-206ENSMUST00000224553 1729 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Vps4bP46467 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps4bP46467 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Gm27646-201ENSMUST00000183989 110 ntBASIC15.29■□□□□ 0.04
Vps4bP46467 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.29■□□□□ 0.04
Vps4bP46467 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps4bP46467 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps4bP46467 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Vps4bP46467 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps4bP46467 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps4bP46467 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Gm4535-201ENSMUST00000182274 558 ntBASIC15.28■□□□□ 0.04
Vps4bP46467 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 AW822252-206ENSMUST00000208904 237 ntBASIC15.28■□□□□ 0.04
Vps4bP46467 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.28■□□□□ 0.04
Vps4bP46467 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps4bP46467 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Gm10355-201ENSMUST00000097146 517 ntBASIC15.28■□□□□ 0.04
Vps4bP46467 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps4bP46467 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps4bP46467 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps4bP46467 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps4bP46467 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.27■□□□□ 0.04
Vps4bP46467 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4bP46467 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps4bP46467 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.27■□□□□ 0.04
Vps4bP46467 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms