Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Gm5479-201ENSMUST00000160578 435 ntBASIC15.45■□□□□ 0.06
Cxcl12P40224 Gm28760-201ENSMUST00000185995 736 ntBASIC15.45■□□□□ 0.06
Cxcl12P40224 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.45■□□□□ 0.06
Cxcl12P40224 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Dupd1-202ENSMUST00000224735 548 ntBASIC15.44■□□□□ 0.06
Cxcl12P40224 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.44■□□□□ 0.06
Cxcl12P40224 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Cxcl12P40224 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cxcl12P40224 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Gm9002-201ENSMUST00000178437 499 ntBASIC15.43■□□□□ 0.06
Cxcl12P40224 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.43■□□□□ 0.06
Cxcl12P40224 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.43■□□□□ 0.06
Cxcl12P40224 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Gm9797-201ENSMUST00000052902 613 ntBASIC15.43■□□□□ 0.06
Cxcl12P40224 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.43■□□□□ 0.06
Cxcl12P40224 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cxcl12P40224 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.42■□□□□ 0.06
Cxcl12P40224 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cxcl12P40224 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.42■□□□□ 0.06
Cxcl12P40224 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cxcl12P40224 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.42■□□□□ 0.06
Cxcl12P40224 Gm10766-202ENSMUST00000194123 606 ntBASIC15.42■□□□□ 0.06
Cxcl12P40224 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cxcl12P40224 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cxcl12P40224 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cxcl12P40224 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cxcl12P40224 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.41■□□□□ 0.06
Cxcl12P40224 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms