Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HmgclP38060 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HmgclP38060 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.86□□□□□ -0.03
HmgclP38060 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.86□□□□□ -0.03
HmgclP38060 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.86□□□□□ -0.03
HmgclP38060 Psmb5-202ENSMUST00000227257 622 ntBASIC14.86□□□□□ -0.03
HmgclP38060 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HmgclP38060 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.85□□□□□ -0.03
HmgclP38060 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HmgclP38060 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.85□□□□□ -0.03
HmgclP38060 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HmgclP38060 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Gm12008-201ENSMUST00000117791 755 ntBASIC14.85□□□□□ -0.03
HmgclP38060 Gm14140-201ENSMUST00000119999 995 ntBASIC14.85□□□□□ -0.03
HmgclP38060 Gm1401-201ENSMUST00000122048 772 ntBASIC14.85□□□□□ -0.03
HmgclP38060 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.85□□□□□ -0.03
HmgclP38060 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HmgclP38060 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.85□□□□□ -0.03
HmgclP38060 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HmgclP38060 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HmgclP38060 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HmgclP38060 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HmgclP38060 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.84□□□□□ -0.03
HmgclP38060 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.84□□□□□ -0.03
HmgclP38060 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HmgclP38060 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
HmgclP38060 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.84□□□□□ -0.03
HmgclP38060 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HmgclP38060 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HmgclP38060 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HmgclP38060 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HmgclP38060 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HmgclP38060 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HmgclP38060 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
HmgclP38060 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HmgclP38060 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HmgclP38060 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms