Protein–RNA interactions for Protein: P28310

Defa3, Alpha-defensin 3, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa3P28310 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Defa3P28310 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Defa3P28310 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.82□□□□□ -0.68
Defa3P28310 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Defa3P28310 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Gm24841-201ENSMUST00000158676 357 ntBASIC10.82□□□□□ -0.68
Defa3P28310 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.82□□□□□ -0.68
Defa3P28310 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.82□□□□□ -0.68
Defa3P28310 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Defa3P28310 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.82□□□□□ -0.68
Defa3P28310 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.81□□□□□ -0.68
Defa3P28310 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.81□□□□□ -0.68
Defa3P28310 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.81□□□□□ -0.68
Defa3P28310 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
Defa3P28310 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Defa3P28310 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Defa3P28310 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Defa3P28310 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Defa3P28310 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Defa3P28310 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.8□□□□□ -0.68
Defa3P28310 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Defa3P28310 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.8□□□□□ -0.68
Defa3P28310 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.8□□□□□ -0.68
Defa3P28310 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.8□□□□□ -0.68
Defa3P28310 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.8□□□□□ -0.68
Defa3P28310 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Defa3P28310 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Defa3P28310 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms