Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.91□□□□□ -0.18
Cd40lgP27548 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm13036-201ENSMUST00000117799 748 ntBASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm1401-201ENSMUST00000122048 772 ntBASIC13.91□□□□□ -0.18
Cd40lgP27548 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.91□□□□□ -0.18
Cd40lgP27548 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cd40lgP27548 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd40lgP27548 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cd40lgP27548 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.9□□□□□ -0.18
Cd40lgP27548 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Cd40lgP27548 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.9□□□□□ -0.18
Cd40lgP27548 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.9□□□□□ -0.18
Cd40lgP27548 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.9□□□□□ -0.18
Cd40lgP27548 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.9□□□□□ -0.18
Cd40lgP27548 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.9□□□□□ -0.18
Cd40lgP27548 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd40lgP27548 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Cd40lgP27548 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cd40lgP27548 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cd40lgP27548 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cd40lgP27548 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Prob1-201ENSMUST00000097619 3021 ntBASIC13.89□□□□□ -0.19
Cd40lgP27548 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.89□□□□□ -0.19
Cd40lgP27548 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms