Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pde6bP23440 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pde6bP23440 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pde6bP23440 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pde6bP23440 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pde6bP23440 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.45■□□□□ 0.22
Pde6bP23440 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.45■□□□□ 0.22
Pde6bP23440 AA543401-201ENSMUST00000164248 1269 ntBASIC16.45■□□□□ 0.22
Pde6bP23440 Gm18889-201ENSMUST00000174284 929 ntBASIC16.45■□□□□ 0.22
Pde6bP23440 Rpph1-201ENSMUST00000175096 319 ntBASIC16.45■□□□□ 0.22
Pde6bP23440 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.45■□□□□ 0.22
Pde6bP23440 Gm2272-201ENSMUST00000194903 582 ntBASIC16.45■□□□□ 0.22
Pde6bP23440 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.45■□□□□ 0.22
Pde6bP23440 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.45■□□□□ 0.22
Pde6bP23440 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.45■□□□□ 0.22
Pde6bP23440 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pde6bP23440 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pde6bP23440 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pde6bP23440 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pde6bP23440 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.44■□□□□ 0.22
Pde6bP23440 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.44■□□□□ 0.22
Pde6bP23440 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pde6bP23440 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pde6bP23440 Gm10499-201ENSMUST00000174094 934 ntBASIC16.44■□□□□ 0.22
Pde6bP23440 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.44■□□□□ 0.22
Pde6bP23440 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.44■□□□□ 0.22
Pde6bP23440 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pde6bP23440 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pde6bP23440 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pde6bP23440 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.43■□□□□ 0.22
Pde6bP23440 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pde6bP23440 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Gm9385-201ENSMUST00000117563 472 ntBASIC16.43■□□□□ 0.22
Pde6bP23440 Gm16198-201ENSMUST00000118766 670 ntBASIC16.43■□□□□ 0.22
Pde6bP23440 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.43■□□□□ 0.22
Pde6bP23440 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.43■□□□□ 0.22
Pde6bP23440 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.43■□□□□ 0.22
Pde6bP23440 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.43■□□□□ 0.22
Pde6bP23440 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.43■□□□□ 0.22
Pde6bP23440 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pde6bP23440 Gm43474-201ENSMUST00000196415 774 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms