Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RaraP11416 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.33■□□□□ 0.2
RaraP11416 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.33■□□□□ 0.2
RaraP11416 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Gm12134-201ENSMUST00000122109 520 ntBASIC16.32■□□□□ 0.2
RaraP11416 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Ank2-226ENSMUST00000189368 339 ntBASIC16.32■□□□□ 0.2
RaraP11416 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.32■□□□□ 0.2
RaraP11416 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RaraP11416 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RaraP11416 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.32■□□□□ 0.2
RaraP11416 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RaraP11416 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RaraP11416 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RaraP11416 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.31■□□□□ 0.2
RaraP11416 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.31■□□□□ 0.2
RaraP11416 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.31■□□□□ 0.2
RaraP11416 Gm4535-201ENSMUST00000182274 558 ntBASIC16.31■□□□□ 0.2
RaraP11416 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44357-201ENSMUST00000195897 142 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm19658-201ENSMUST00000196231 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44367-201ENSMUST00000196836 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44350-201ENSMUST00000197197 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44390-201ENSMUST00000197533 144 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44313-201ENSMUST00000198018 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44486-201ENSMUST00000198508 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44314-201ENSMUST00000199263 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44394-201ENSMUST00000199558 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44484-201ENSMUST00000199873 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44466-201ENSMUST00000200264 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 Gm44359-201ENSMUST00000200671 138 ntBASIC16.31■□□□□ 0.2
RaraP11416 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.31■□□□□ 0.2
RaraP11416 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Gm10355-201ENSMUST00000097146 517 ntBASIC16.31■□□□□ 0.2
RaraP11416 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.31■□□□□ 0.2
RaraP11416 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RaraP11416 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.3■□□□□ 0.2
RaraP11416 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.3■□□□□ 0.2
RaraP11416 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RaraP11416 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.3■□□□□ 0.2
RaraP11416 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RaraP11416 Gm13418-201ENSMUST00000119097 944 ntBASIC16.3■□□□□ 0.2
RaraP11416 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.3■□□□□ 0.2
RaraP11416 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.3■□□□□ 0.2
RaraP11416 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.3■□□□□ 0.2
RaraP11416 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RaraP11416 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RaraP11416 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RaraP11416 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RaraP11416 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms