Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PtcraP0C6B2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.09□□□□□ -0.31
PtcraP0C6B2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.09□□□□□ -0.31
PtcraP0C6B2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.09□□□□□ -0.31
PtcraP0C6B2 Psmb5-202ENSMUST00000227257 622 ntBASIC13.09□□□□□ -0.31
PtcraP0C6B2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PtcraP0C6B2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PtcraP0C6B2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.08□□□□□ -0.32
PtcraP0C6B2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.08□□□□□ -0.32
PtcraP0C6B2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PtcraP0C6B2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.07□□□□□ -0.32
PtcraP0C6B2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.07□□□□□ -0.32
PtcraP0C6B2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Sybu-209ENSMUST00000228639 4113 ntBASIC13.07□□□□□ -0.32
PtcraP0C6B2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PtcraP0C6B2 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.07□□□□□ -0.32
PtcraP0C6B2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PtcraP0C6B2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms