Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.66□□□□□ -0.38
Hoxa3P02831 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.66□□□□□ -0.38
Hoxa3P02831 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.66□□□□□ -0.38
Hoxa3P02831 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxa3P02831 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.65□□□□□ -0.38
Hoxa3P02831 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.65□□□□□ -0.38
Hoxa3P02831 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Hoxa3P02831 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Gm25925-201ENSMUST00000158314 306 ntBASIC12.65□□□□□ -0.38
Hoxa3P02831 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Hoxa3P02831 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxa3P02831 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxa3P02831 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.64□□□□□ -0.39
Hoxa3P02831 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxa3P02831 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Hoxa3P02831 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.64□□□□□ -0.39
Hoxa3P02831 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxa3P02831 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.64□□□□□ -0.39
Hoxa3P02831 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxa3P02831 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxa3P02831 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms