Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.47■□□□□ 0.07
Syn1O88935 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.47■□□□□ 0.07
Syn1O88935 AY702102-202ENSMUST00000194651 1173 ntBASIC15.47■□□□□ 0.07
Syn1O88935 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Syn1O88935 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Syn1O88935 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Syn1O88935 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Syn1O88935 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Syn1O88935 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Syn1O88935 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Syn1O88935 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Syn1O88935 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.46■□□□□ 0.07
Syn1O88935 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.46■□□□□ 0.07
Syn1O88935 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.46■□□□□ 0.07
Syn1O88935 Gm11425-201ENSMUST00000119608 498 ntBASIC15.46■□□□□ 0.07
Syn1O88935 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.46■□□□□ 0.07
Syn1O88935 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Syn1O88935 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Syn1O88935 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Syn1O88935 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.46■□□□□ 0.07
Syn1O88935 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.46■□□□□ 0.07
Syn1O88935 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Gm9396-201ENSMUST00000076703 567 ntBASIC15.46■□□□□ 0.07
Syn1O88935 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Syn1O88935 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Syn1O88935 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Syn1O88935 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Syn1O88935 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.46■□□□□ 0.06
Syn1O88935 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Syn1O88935 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Syn1O88935 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.46■□□□□ 0.06
Syn1O88935 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.45■□□□□ 0.06
Syn1O88935 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Syn1O88935 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Syn1O88935 Gm17150-201ENSMUST00000165577 381 ntBASIC15.45■□□□□ 0.06
Syn1O88935 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.45■□□□□ 0.06
Syn1O88935 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Gm20445-201ENSMUST00000061905 565 ntBASIC15.45■□□□□ 0.06
Syn1O88935 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.45■□□□□ 0.06
Syn1O88935 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.45■□□□□ 0.06
Syn1O88935 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Syn1O88935 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Syn1O88935 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.44■□□□□ 0.06
Syn1O88935 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.44■□□□□ 0.06
Syn1O88935 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.44■□□□□ 0.06
Syn1O88935 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.44■□□□□ 0.06
Syn1O88935 Gm11918-201ENSMUST00000121660 179 ntBASIC15.44■□□□□ 0.06
Syn1O88935 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.44■□□□□ 0.06
Syn1O88935 Gm45668-201ENSMUST00000211271 493 ntBASIC15.44■□□□□ 0.06
Syn1O88935 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Gm15823-201ENSMUST00000064305 670 ntBASIC15.44■□□□□ 0.06
Syn1O88935 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Syn1O88935 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms