Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.46□□□□□ -0.09
Best1O88870 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Best1O88870 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Best1O88870 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Best1O88870 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.46□□□□□ -0.09
Best1O88870 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Best1O88870 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Best1O88870 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Best1O88870 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Best1O88870 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Best1O88870 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Best1O88870 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Best1O88870 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.45□□□□□ -0.1
Best1O88870 Gm27920-201ENSMUST00000183953 96 ntBASIC14.45□□□□□ -0.1
Best1O88870 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Gm38225-201ENSMUST00000194001 393 ntBASIC14.45□□□□□ -0.1
Best1O88870 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.45□□□□□ -0.1
Best1O88870 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Best1O88870 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Best1O88870 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Best1O88870 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Best1O88870 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.44□□□□□ -0.1
Best1O88870 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.44□□□□□ -0.1
Best1O88870 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Best1O88870 Mir449b-201ENSMUST00000104833 80 ntBASIC14.44□□□□□ -0.1
Best1O88870 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.44□□□□□ -0.1
Best1O88870 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.44□□□□□ -0.1
Best1O88870 Gm10253-201ENSMUST00000194270 940 ntBASIC14.44□□□□□ -0.1
Best1O88870 Gm44872-201ENSMUST00000207864 420 ntBASIC14.44□□□□□ -0.1
Best1O88870 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.44□□□□□ -0.1
Best1O88870 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.44□□□□□ -0.1
Best1O88870 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.44□□□□□ -0.1
Best1O88870 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Best1O88870 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Best1O88870 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Best1O88870 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Best1O88870 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.43□□□□□ -0.1
Best1O88870 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms