Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hcn3O88705 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hcn3O88705 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
Hcn3O88705 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hcn3O88705 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.47□□□□□ -0.09
Hcn3O88705 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.47□□□□□ -0.09
Hcn3O88705 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hcn3O88705 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hcn3O88705 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hcn3O88705 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Hcn3O88705 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.47□□□□□ -0.09
Hcn3O88705 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hcn3O88705 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.47□□□□□ -0.09
Hcn3O88705 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Hcn3O88705 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn3O88705 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.46□□□□□ -0.09
Hcn3O88705 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hcn3O88705 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.46□□□□□ -0.09
Hcn3O88705 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.46□□□□□ -0.09
Hcn3O88705 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.46□□□□□ -0.09
Hcn3O88705 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.46□□□□□ -0.09
Hcn3O88705 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn3O88705 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn3O88705 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Hcn3O88705 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hcn3O88705 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.45□□□□□ -0.1
Hcn3O88705 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.45□□□□□ -0.1
Hcn3O88705 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Gm27704-201ENSMUST00000185094 107 ntBASIC14.45□□□□□ -0.1
Hcn3O88705 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hcn3O88705 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.45□□□□□ -0.1
Hcn3O88705 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.45□□□□□ -0.1
Hcn3O88705 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hcn3O88705 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn3O88705 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.44□□□□□ -0.1
Hcn3O88705 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn3O88705 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms