Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Gm7584-201ENSMUST00000175829 940 ntBASIC14.58□□□□□ -0.08
Cacna1hO88427 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Cacna1hO88427 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Gm24526-201ENSMUST00000082921 158 ntBASIC14.58□□□□□ -0.08
Cacna1hO88427 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacna1hO88427 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacna1hO88427 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Mir8109-201ENSMUST00000184375 117 ntBASIC14.58□□□□□ -0.08
Cacna1hO88427 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Mir1894-201ENSMUST00000122802 81 ntBASIC14.57□□□□□ -0.08
Cacna1hO88427 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.57□□□□□ -0.08
Cacna1hO88427 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1hO88427 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.57□□□□□ -0.08
Cacna1hO88427 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1hO88427 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cacna1hO88427 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 Gm8463-201ENSMUST00000208573 613 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Mir7070-201ENSMUST00000183657 86 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1hO88427 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.56□□□□□ -0.08
Cacna1hO88427 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1hO88427 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 Gm28911-201ENSMUST00000188837 117 ntBASIC14.55□□□□□ -0.08
Cacna1hO88427 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.55□□□□□ -0.08
Cacna1hO88427 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.55□□□□□ -0.08
Cacna1hO88427 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1hO88427 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
Cacna1hO88427 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1hO88427 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1hO88427 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms