Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ubr1O70481 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ubr1O70481 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Gm10275-202ENSMUST00000168697 495 ntBASIC19.31■□□□□ 0.68
Ubr1O70481 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.31■□□□□ 0.68
Ubr1O70481 Gm20445-201ENSMUST00000061905 565 ntBASIC19.31■□□□□ 0.68
Ubr1O70481 Gm10275-201ENSMUST00000092620 635 ntBASIC19.31■□□□□ 0.68
Ubr1O70481 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ubr1O70481 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubr1O70481 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.3■□□□□ 0.68
Ubr1O70481 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Ubr1O70481 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.3■□□□□ 0.68
Ubr1O70481 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ubr1O70481 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr1O70481 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.29■□□□□ 0.68
Ubr1O70481 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.29■□□□□ 0.68
Ubr1O70481 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.29■□□□□ 0.68
Ubr1O70481 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.29■□□□□ 0.68
Ubr1O70481 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.29■□□□□ 0.68
Ubr1O70481 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.29■□□□□ 0.68
Ubr1O70481 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.29■□□□□ 0.68
Ubr1O70481 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.29■□□□□ 0.68
Ubr1O70481 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ubr1O70481 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr1O70481 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.28■□□□□ 0.68
Ubr1O70481 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Gm8515-201ENSMUST00000194852 576 ntBASIC19.28■□□□□ 0.68
Ubr1O70481 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.28■□□□□ 0.68
Ubr1O70481 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr1O70481 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.28■□□□□ 0.68
Ubr1O70481 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.27■□□□□ 0.68
Ubr1O70481 Gm9182-201ENSMUST00000217829 639 ntBASIC19.27■□□□□ 0.68
Ubr1O70481 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.27■□□□□ 0.68
Ubr1O70481 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.27■□□□□ 0.68
Ubr1O70481 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr1O70481 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ubr1O70481 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Ubr1O70481 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.27■□□□□ 0.67
Ubr1O70481 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Ubr1O70481 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ubr1O70481 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.27■□□□□ 0.67
Ubr1O70481 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ubr1O70481 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr1O70481 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms