Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pdlim1O70400 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Gm5264-201ENSMUST00000190584 848 ntBASIC14.87□□□□□ -0.03
Pdlim1O70400 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pdlim1O70400 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim1O70400 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.86□□□□□ -0.03
Pdlim1O70400 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Gm14494-201ENSMUST00000118786 435 ntBASIC14.86□□□□□ -0.03
Pdlim1O70400 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.86□□□□□ -0.03
Pdlim1O70400 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Pdlim1O70400 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim1O70400 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.86□□□□□ -0.03
Pdlim1O70400 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.86□□□□□ -0.03
Pdlim1O70400 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pdlim1O70400 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim1O70400 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim1O70400 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms