Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Celf4-206ENSMUST00000224553 1729 ntBASIC13.68□□□□□ -0.22
Pdlim3O70209 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.68□□□□□ -0.22
Pdlim3O70209 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.67□□□□□ -0.22
Pdlim3O70209 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.67□□□□□ -0.22
Pdlim3O70209 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdlim3O70209 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Pdlim3O70209 Gm25745-201ENSMUST00000174945 133 ntBASIC13.67□□□□□ -0.22
Pdlim3O70209 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.67□□□□□ -0.22
Pdlim3O70209 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim3O70209 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim3O70209 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim3O70209 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim3O70209 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.66□□□□□ -0.22
Pdlim3O70209 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms