Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.5□□□□□ -0.25
Dkk1O54908 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC13.5□□□□□ -0.25
Dkk1O54908 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC13.5□□□□□ -0.25
Dkk1O54908 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC13.5□□□□□ -0.25
Dkk1O54908 Gm43531-201ENSMUST00000200676 1114 ntBASIC13.5□□□□□ -0.25
Dkk1O54908 AC102352.1-201ENSMUST00000224187 582 ntBASIC13.5□□□□□ -0.25
Dkk1O54908 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Dkk1O54908 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Dkk1O54908 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.5□□□□□ -0.25
Dkk1O54908 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Dkk1O54908 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Dkk1O54908 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.49□□□□□ -0.25
Dkk1O54908 Gm5046-201ENSMUST00000100608 611 ntBASIC13.49□□□□□ -0.25
Dkk1O54908 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Dkk1O54908 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Dkk1O54908 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Dkk1O54908 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.49□□□□□ -0.25
Dkk1O54908 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC13.49□□□□□ -0.25
Dkk1O54908 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC13.49□□□□□ -0.25
Dkk1O54908 Gm44958-201ENSMUST00000203734 736 ntBASIC13.49□□□□□ -0.25
Dkk1O54908 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.49□□□□□ -0.25
Dkk1O54908 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Dkk1O54908 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Dkk1O54908 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.49□□□□□ -0.25
Dkk1O54908 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Dkk1O54908 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm12584-201ENSMUST00000117109 1105 ntBASIC13.48□□□□□ -0.25
Dkk1O54908 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm11780-201ENSMUST00000136880 516 ntBASIC13.48□□□□□ -0.25
Dkk1O54908 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.48□□□□□ -0.25
Dkk1O54908 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.48□□□□□ -0.25
Dkk1O54908 Gm45636-201ENSMUST00000210497 1064 ntBASIC13.48□□□□□ -0.25
Dkk1O54908 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC13.48□□□□□ -0.25
Dkk1O54908 Gm6296-201ENSMUST00000222599 943 ntBASIC13.48□□□□□ -0.25
Dkk1O54908 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms