Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.25■□□□□ 0.03
ChkaO54804 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ChkaO54804 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.25■□□□□ 0.03
ChkaO54804 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.25■□□□□ 0.03
ChkaO54804 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ChkaO54804 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ChkaO54804 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.24■□□□□ 0.03
ChkaO54804 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ChkaO54804 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Birc2-201ENSMUST00000054878 378 ntBASIC15.24■□□□□ 0.03
ChkaO54804 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ChkaO54804 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ChkaO54804 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ChkaO54804 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ChkaO54804 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ChkaO54804 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.23■□□□□ 0.03
ChkaO54804 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.23■□□□□ 0.03
ChkaO54804 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.23■□□□□ 0.03
ChkaO54804 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.23■□□□□ 0.03
ChkaO54804 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ChkaO54804 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ChkaO54804 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ChkaO54804 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ChkaO54804 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ChkaO54804 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ChkaO54804 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Carlr-201ENSMUST00000181515 2574 ntBASIC15.22■□□□□ 0.03
ChkaO54804 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ChkaO54804 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ChkaO54804 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ChkaO54804 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.22■□□□□ 0.03
ChkaO54804 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
ChkaO54804 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ChkaO54804 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ChkaO54804 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms