Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.31■□□□□ 0.2
Per1O35973 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Per1O35973 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.3■□□□□ 0.2
Per1O35973 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Per1O35973 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Gm13464-201ENSMUST00000119418 935 ntBASIC16.3■□□□□ 0.2
Per1O35973 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.3■□□□□ 0.2
Per1O35973 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.3■□□□□ 0.2
Per1O35973 Gm27920-201ENSMUST00000183953 96 ntBASIC16.3■□□□□ 0.2
Per1O35973 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Gm5312-201ENSMUST00000203728 547 ntBASIC16.3■□□□□ 0.2
Per1O35973 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.3■□□□□ 0.2
Per1O35973 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.3■□□□□ 0.2
Per1O35973 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.3■□□□□ 0.2
Per1O35973 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Per1O35973 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Per1O35973 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.29■□□□□ 0.2
Per1O35973 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.29■□□□□ 0.2
Per1O35973 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.29■□□□□ 0.2
Per1O35973 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.29■□□□□ 0.2
Per1O35973 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.29■□□□□ 0.2
Per1O35973 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Per1O35973 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Per1O35973 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Per1O35973 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Gm22065-201ENSMUST00000103753 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm22066-201ENSMUST00000103761 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24932-201ENSMUST00000103763 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24115-201ENSMUST00000103799 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm22190-201ENSMUST00000103827 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm22191-201ENSMUST00000103831 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24721-201ENSMUST00000103849 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm28018-201ENSMUST00000103869 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm26399-201ENSMUST00000103937 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Per1O35973 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.28■□□□□ 0.2
Per1O35973 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25349-201ENSMUST00000177728 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm23616-201ENSMUST00000177797 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25871-201ENSMUST00000177816 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24752-201ENSMUST00000178240 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24496-201ENSMUST00000178287 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25649-201ENSMUST00000178476 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25548-201ENSMUST00000178681 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm23147-201ENSMUST00000178841 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm26095-201ENSMUST00000179270 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm22171-201ENSMUST00000179283 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm23936-201ENSMUST00000179354 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm22619-201ENSMUST00000179516 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25255-201ENSMUST00000179579 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24755-201ENSMUST00000179691 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm26506-201ENSMUST00000179692 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm25086-201ENSMUST00000179931 110 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms