Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm11764-201ENSMUST00000120221 623 ntBASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm5682-201ENSMUST00000173402 505 ntBASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nr1i3O35627 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nr1i3O35627 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nr1i3O35627 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.21■□□□□ 0.18
Nr1i3O35627 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Nr1i3O35627 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.2■□□□□ 0.18
Nr1i3O35627 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nr1i3O35627 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nr1i3O35627 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Nr1i3O35627 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.19■□□□□ 0.18
Nr1i3O35627 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nr1i3O35627 Gm7222-201ENSMUST00000117512 906 ntBASIC16.19■□□□□ 0.18
Nr1i3O35627 Gm12008-201ENSMUST00000117791 755 ntBASIC16.19■□□□□ 0.18
Nr1i3O35627 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Gm23547-201ENSMUST00000158210 271 ntBASIC16.19■□□□□ 0.18
Nr1i3O35627 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.19■□□□□ 0.18
Nr1i3O35627 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.19■□□□□ 0.18
Nr1i3O35627 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.19■□□□□ 0.18
Nr1i3O35627 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Nr1i3O35627 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1i3O35627 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nr1i3O35627 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nr1i3O35627 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Nr1i3O35627 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Nr1i3O35627 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Nr1i3O35627 Gm27459-201ENSMUST00000184860 107 ntBASIC16.18■□□□□ 0.18
Nr1i3O35627 Gm34391-201ENSMUST00000203706 907 ntBASIC16.18■□□□□ 0.18
Nr1i3O35627 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.18■□□□□ 0.18
Nr1i3O35627 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nr1i3O35627 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1i3O35627 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1i3O35627 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nr1i3O35627 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1i3O35627 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1i3O35627 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1i3O35627 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms