Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Clcn6O35454 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn6O35454 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm21362-201ENSMUST00000194272 928 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 AC156574.1-201ENSMUST00000227084 452 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.42■□□□□ 0.22
Clcn6O35454 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn6O35454 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn6O35454 BC037039-201ENSMUST00000192003 2205 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn6O35454 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn6O35454 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn6O35454 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn6O35454 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Gm37722-201ENSMUST00000193757 208 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Gm36974-201ENSMUST00000194200 1071 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.41■□□□□ 0.22
Clcn6O35454 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn6O35454 AC158388.1-201ENSMUST00000225441 256 ntBASIC16.41■□□□□ 0.22
Clcn6O35454 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clcn6O35454 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clcn6O35454 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn6O35454 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.4■□□□□ 0.22
Clcn6O35454 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC16.4■□□□□ 0.22
Clcn6O35454 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Clcn6O35454 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Clcn6O35454 Gm25037-201ENSMUST00000175418 110 ntBASIC16.4■□□□□ 0.22
Clcn6O35454 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn6O35454 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.4■□□□□ 0.22
Clcn6O35454 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC16.4■□□□□ 0.22
Clcn6O35454 Gm45078-201ENSMUST00000205343 546 ntBASIC16.4■□□□□ 0.22
Clcn6O35454 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC16.4■□□□□ 0.22
Clcn6O35454 AC126043.1-201ENSMUST00000221304 1141 ntBASIC16.4■□□□□ 0.22
Clcn6O35454 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Gm7367-201ENSMUST00000057611 492 ntBASIC16.4■□□□□ 0.22
Clcn6O35454 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clcn6O35454 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clcn6O35454 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn6O35454 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn6O35454 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clcn6O35454 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clcn6O35454 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms