Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Polr2jO08740 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Polr2jO08740 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Polr2jO08740 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Polr2jO08740 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.48□□□□□ -0.09
Polr2jO08740 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.48□□□□□ -0.09
Polr2jO08740 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.48□□□□□ -0.09
Polr2jO08740 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Polr2jO08740 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Polr2jO08740 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.48□□□□□ -0.09
Polr2jO08740 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.48□□□□□ -0.09
Polr2jO08740 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Polr2jO08740 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Polr2jO08740 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.47□□□□□ -0.09
Polr2jO08740 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.47□□□□□ -0.09
Polr2jO08740 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Polr2jO08740 Gm15358-201ENSMUST00000119249 520 ntBASIC14.47□□□□□ -0.09
Polr2jO08740 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Polr2jO08740 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.47□□□□□ -0.09
Polr2jO08740 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.47□□□□□ -0.09
Polr2jO08740 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Polr2jO08740 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Polr2jO08740 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Polr2jO08740 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.46□□□□□ -0.09
Polr2jO08740 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Polr2jO08740 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.46□□□□□ -0.09
Polr2jO08740 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Polr2jO08740 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Polr2jO08740 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Polr2jO08740 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Polr2jO08740 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.46□□□□□ -0.1
Polr2jO08740 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Polr2jO08740 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Polr2jO08740 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms