Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf11bO08712 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf11bO08712 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf11bO08712 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf11bO08712 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf11bO08712 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11bO08712 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Gm21362-201ENSMUST00000194272 928 ntBASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Gm43347-201ENSMUST00000200226 580 ntBASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11bO08712 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gm25990-201ENSMUST00000102440 86 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gm34391-201ENSMUST00000203706 907 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Birc2-201ENSMUST00000054878 378 ntBASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11bO08712 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11bO08712 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms