Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcf11G3X9Z4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcf11G3X9Z4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Gm6912-201ENSMUST00000117218 544 ntBASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Gm7820-201ENSMUST00000121012 1052 ntBASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Gm42918-201ENSMUST00000199249 1580 ntBASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcf11G3X9Z4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Gm42901-201ENSMUST00000197735 3171 ntBASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Gm6218-201ENSMUST00000219812 628 ntBASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcf11G3X9Z4 BC001981-202ENSMUST00000191393 1545 ntBASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Gm14042-201ENSMUST00000120139 833 ntBASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Gm5745-201ENSMUST00000183748 313 ntBASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcf11G3X9Z4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 AC130829.1-201ENSMUST00000221548 494 ntBASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcf11G3X9Z4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 AL593843.1-201ENSMUST00000195891 145 ntBASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcf11G3X9Z4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms