Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Srp72F8VQC1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Srp72F8VQC1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Srp72F8VQC1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Srp72F8VQC1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Srp72F8VQC1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gm12134-201ENSMUST00000122109 520 ntBASIC14.83□□□□□ -0.04
Srp72F8VQC1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.83□□□□□ -0.04
Srp72F8VQC1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp72F8VQC1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.82□□□□□ -0.04
Srp72F8VQC1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Gm12895-201ENSMUST00000122214 226 ntBASIC14.82□□□□□ -0.04
Srp72F8VQC1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp72F8VQC1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Srp72F8VQC1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.81□□□□□ -0.04
Srp72F8VQC1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.81□□□□□ -0.04
Srp72F8VQC1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp72F8VQC1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.8□□□□□ -0.04
Srp72F8VQC1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.8□□□□□ -0.04
Srp72F8VQC1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp72F8VQC1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms