Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.18□□□□□ -0.14
Colca2F8VPY8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.18□□□□□ -0.14
Colca2F8VPY8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 AY702102-202ENSMUST00000194651 1173 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm2451-201ENSMUST00000199447 999 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Gm10290-201ENSMUST00000200451 999 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Colca2F8VPY8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.17□□□□□ -0.14
Colca2F8VPY8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.16□□□□□ -0.14
Colca2F8VPY8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Colca2F8VPY8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.15□□□□□ -0.14
Colca2F8VPY8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Gm6007-201ENSMUST00000208170 823 ntBASIC14.15□□□□□ -0.14
Colca2F8VPY8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Colca2F8VPY8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms