Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh1F7BJK1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh1F7BJK1 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.58□□□□□ -0.23
Pcdh1F7BJK1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh1F7BJK1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh1F7BJK1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Olfr129-201ENSMUST00000122318 993 ntBASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh1F7BJK1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm8318-201ENSMUST00000182954 872 ntBASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh1F7BJK1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms