Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Gm6013-201ENSMUST00000212264 699 ntBASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Gm45453-201ENSMUST00000211758 853 ntBASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc188F6WEU2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Gm5370-201ENSMUST00000187187 574 ntBASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Gm18307-201ENSMUST00000206864 949 ntBASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc188F6WEU2 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm27516-201ENSMUST00000184237 98 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc188F6WEU2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc188F6WEU2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc188F6WEU2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms