Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm14026-201ENSMUST00000120625 1789 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm18212-201ENSMUST00000211678 889 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm44999-201ENSMUST00000207456 1493 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm45760-201ENSMUST00000212190 1782 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm14277-201ENSMUST00000121195 360 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm7857-201ENSMUST00000117957 358 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc1E9PZP8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm23200-201ENSMUST00000104379 132 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC8.28□□□□□ -1.08
Herc1E9PZP8 Gm10608-202ENSMUST00000213924 676 ntBASIC8.28□□□□□ -1.08
Herc1E9PZP8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.27□□□□□ -1.08
Herc1E9PZP8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Herc1E9PZP8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Herc1E9PZP8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Herc1E9PZP8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC8.27□□□□□ -1.08
Herc1E9PZP8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Herc1E9PZP8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gm12241-201ENSMUST00000118330 726 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gm5279-201ENSMUST00000199575 745 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 AC154176.1-201ENSMUST00000225897 220 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gm27320-201ENSMUST00000184892 109 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC8.27□□□□□ -1.09
Herc1E9PZP8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Herc1E9PZP8 CT010506.4-201ENSMUST00000225457 351 ntBASIC8.26□□□□□ -1.09
Herc1E9PZP8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Herc1E9PZP8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms