Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Gm44364-201ENSMUST00000198368 141 ntBASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Proscos-202ENSMUST00000178990 666 ntBASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a3E9PWQ3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Mir5120-201ENSMUST00000175020 78 ntBASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.83□□□□□ -0.03
Col6a3E9PWQ3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a3E9PWQ3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm29649-201ENSMUST00000185649 419 ntBASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm14130-201ENSMUST00000118417 987 ntBASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a3E9PWQ3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a3E9PWQ3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms