Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Phf11cB4XVP9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Gm27704-201ENSMUST00000185094 107 ntBASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phf11cB4XVP9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Gm14722-201ENSMUST00000118943 689 ntBASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.32□□□□□ -0.12
Phf11cB4XVP9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Gm13836-201ENSMUST00000121159 501 ntBASIC14.31□□□□□ -0.12
Phf11cB4XVP9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Gm7284-201ENSMUST00000131667 944 ntBASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.31□□□□□ -0.12
Phf11cB4XVP9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Phf11cB4XVP9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.3□□□□□ -0.12
Phf11cB4XVP9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.3□□□□□ -0.12
Phf11cB4XVP9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Phf11cB4XVP9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms