Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Gm27011-201ENSMUST00000182352 972 ntBASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.22□□□□□ -0.45
Gm12887B1AVM1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm12887B1AVM1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Mir5130-201ENSMUST00000175160 84 ntBASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm12887B1AVM1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.21□□□□□ -0.46
Gm12887B1AVM1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Gm14722-201ENSMUST00000118943 689 ntBASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Gm13436-201ENSMUST00000120418 567 ntBASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms