Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.3■□□□□ 0.04
Col4a6B1AVK5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col4a6B1AVK5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Gm6916-202ENSMUST00000205523 195 ntBASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col4a6B1AVK5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm8602-201ENSMUST00000184045 607 ntBASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm9899-201ENSMUST00000065519 555 ntBASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm6007-201ENSMUST00000208170 823 ntBASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.28■□□□□ 0.04
Col4a6B1AVK5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.27■□□□□ 0.04
Col4a6B1AVK5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col4a6B1AVK5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col4a6B1AVK5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col4a6B1AVK5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.27■□□□□ 0.03
Col4a6B1AVK5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col4a6B1AVK5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms