Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm5640A3KG49 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.31■□□□□ 0.04
Gm5640A3KG49 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm5640A3KG49 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.3■□□□□ 0.04
Gm5640A3KG49 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm5640A3KG49 Carlr-201ENSMUST00000181515 2574 ntBASIC15.3■□□□□ 0.04
Gm5640A3KG49 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.29■□□□□ 0.04
Gm5640A3KG49 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.29■□□□□ 0.04
Gm5640A3KG49 Gm10252-201ENSMUST00000209541 832 ntBASIC15.29■□□□□ 0.04
Gm5640A3KG49 Gm30025-201ENSMUST00000218555 728 ntBASIC15.29■□□□□ 0.04
Gm5640A3KG49 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.29■□□□□ 0.04
Gm5640A3KG49 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms