Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12d-1A0N8R0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm15358-201ENSMUST00000119249 520 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm10231-201ENSMUST00000181584 441 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm10175-202ENSMUST00000208752 441 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12d-1A0N8R0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm4459-201ENSMUST00000118750 468 ntBASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Grk6-207ENSMUST00000225925 2769 ntBASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12d-1A0N8R0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-1A0N8R0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms