Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm11780-201ENSMUST00000136880 516 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc112A0AUP1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.23■□□□□ 0.35
Ccdc112A0AUP1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Gm10499-201ENSMUST00000174094 934 ntBASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc112A0AUP1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms