Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm45747-201ENSMUST00000212203 999 ntBASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm18206-201ENSMUST00000207027 926 ntBASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm2272-201ENSMUST00000194903 582 ntBASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.27■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.26■□□□□ 0.51
Atg4a-psA0A0G2JFS9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms