Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv3A0A0A6YYE2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv3A0A0A6YYE2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv3A0A0A6YYE2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms