Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav21-dv12A0A075B6C4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm15358-201ENSMUST00000119249 520 ntBASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ank2-226ENSMUST00000189368 339 ntBASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav21-dv12A0A075B6C4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms